Folding keeps getting errors!
Tim
Southwest PA Icrontian
For the last 3 work units IN A ROW, it seems that folding is finishing a job, sending it to Stanford, getting a new work unit, and then screwing itself up. My computer isn't overclocked at all, no thanks to the Antec power supply, and all motherboard voltages are at default values.
Here's the log file, starting a few frames from finishing the last job:
[01:08:50] Finished a frame (245)
[01:09:25] Finished a frame (246)
[01:09:59] Finished a frame (247)
[01:10:34] Finished a frame (248)
[01:11:09] Finished a frame (249)
[01:11:44] Finished a frame (250)
[01:11:44] TINKER is Exiting following Normal Termination
[01:11:44]
[01:11:44] Finished Work Unit:
[01:11:44] ARC file integrity verified
[01:11:44] logfile size: 12529
[01:11:44] Leaving Run
[01:11:49] - Writing 652753 bytes of core data to disk.
[01:11:49] end (WriteWorkResults)
[01:11:49] - Shutting down core
[01:11:49]
[01:11:49] Folding@home Core Shutdown: FINISHED_UNIT
[01:11:53] CoreStatus = 64 (100)
[01:11:53] Sending work to server
[01:11:53] + Attempting to send results
[01:12:15] + Results successfully sent
[01:12:15] Thank you for your contribution to Folding@Home.
[01:12:15] + Number of Units Completed: 7
[01:12:19] - Preparing to get new work unit...
[01:12:19] + Attempting to get work packet
[01:12:19] - Connecting to assignment server
[01:12:19] - Successful: assigned to (171.65.103.148).
[01:12:19] + News From Folding@Home: Welcome to Folding@Home
[01:12:19] Loaded queue successfully.
[01:12:20] + Closed connections
[01:12:20]
[01:12:20] + Processing work unit
[01:12:20] Core required: FahCore_65.exe
[01:12:20] Core found.
[01:12:20] Working on Unit 08 [December 12 01:12:20]
[01:12:20] + Working ...
[01:12:20] Folding@Home Client Core Version 2.53 (June 29, 2004)
[01:12:20]
[01:12:20] Proj: work/wudata_08
[01:12:20] Done: 9641 -> 59946 (decompressed 621.7 percent)
[01:12:20] nsteps: 250000 dt: 2.000000 dt_dump: 20.000000 temperature: 298.000000
[01:12:20] xyzfile:
[01:12:20] " 385 p591_BBA5_pf
[01:12:20] 1 CT 41.760000 30.940000 2.440000 340 2..."
[01:12:20] keyfile:
[01:12:20] "NOVERSION
[01:12:20] ARCHIVE
[01:12:20]
[01:12:20] VDW-CUTOFF 10.0
[01:12:20] VDW-TAPER 8.0
[01:12:20] REACTIONFIELD 10...."
[01:12:20]
[01:12:20] - Couldn't get size info for dyn file: work/wudata_08.dyn
[01:12:20] Starting from initial work packet
[01:12:20]
[01:12:20] Protein: p591_BBA5_pf
[01:12:20] - Run: 52 (Clone 98, Gen 0)
[01:12:20] - Frames Completed: 0, Remaining: 250
[01:12:20] - Dynamic steps required: 250000
[01:12:20]
[01:12:20] Writing local files:
[01:12:20]
[01:12:20] parameters work/wudata_08.prm
[01:12:20] - Writing "work/wudata_08.key": (overwrite) successful.
[01:12:20] - Writing "work/wudata_08.xyz": (overwrite) successful.
[01:12:20] - Writing "work/wudata_08.prm": (overwrite) successful.
[01:12:20] - Writing "work/wudata_08.key": (append) successful.
[01:12:20]
[01:12:20] PROJECT="work/wudata_08", NSTEPS=250000, DT=2.0000, DTDUMP=2.000000, TEMP=298.00
[01:12:21] TINKER: Software Tools for Molecular Design
[01:12:21] Version 3.8 October 2000
[01:12:21] Copyright (c) Jay William Ponder 1990-2000
[01:12:21] portions Copyright (c) Michael Shirts 2001
[01:12:21] portions Copyright (c) Vijay S Pande 2001
[01:12:55] Finished a frame (1)
[01:13:30] Finished a frame (2)
[01:14:05] Finished a frame (3)
[01:14:40] Finished a frame (4)
[01:15:14] Finished a frame (5)
[01:15:49] Finished a frame (6)
[01:16:24] Finished a frame (7)
[01:16:59] Finished a frame (8)
[01:17:34] Finished a frame (9)
[01:18:08] Finished a frame (10)
[01:18:43] Finished a frame (11)
[01:19:18] Finished a frame (12)
[01:19:53] Finished a frame (13)
[01:20:27] Finished a frame (14)
--- Opening Log file [December 12 01:20:48]
# Windows Graphical Edition ###################################################
###############################################################################
Folding@Home Client Version 5.03
http://folding.stanford.edu
###############################################################################
###############################################################################
Launch directory: C:\Program Files\Folding@Home
[01:20:48] - Ask before connecting: No
[01:20:48] - User name: Tim225 (Team 93)
[01:20:48] - User ID: 7752F2927579D5AD
[01:20:48] - Machine ID: 1
[01:20:48]
[01:20:48] Loaded queue successfully.
[01:20:48] Initialization complete
[01:20:48] + Benchmarking ...
[01:20:51]
[01:20:51] + Processing work unit
[01:20:51] Core required: FahCore_65.exe
[01:20:51] Core found.
[01:20:51] Working on Unit 08 [December 12 01:20:51]
[01:20:51] + Working ...
[01:20:52] + Working...
[01:20:53] Folding@Home Client Core Version 2.53 (June 29, 2004)
[01:20:53]
[01:20:53] Proj: work/wudata_08
[01:20:53] Done: 9641 -> 59946 (decompressed 621.7 percent)
[01:20:53] nsteps: 250000 dt: 2.000000 dt_dump: 20.000000 temperature: 298.000000
[01:20:53] xyzfile:
[01:20:53] " 385 p591_BBA5_pf
[01:20:53] 1 CT 41.760000 30.940000 2.440000 340 2..."
[01:20:53] keyfile:
[01:20:53] "NOVERSION
[01:20:53] ARCHIVE
[01:20:53]
[01:20:53] VDW-CUTOFF 10.0
[01:20:53] VDW-TAPER 8.0
[01:20:53] REACTIONFIELD 10...."
[01:20:53]
[01:20:53] Hashes matched on file work/wudata_08.dyn
[01:20:53] ARC file integrity verified
[01:20:53] Restarting from checkpointed files.
[01:20:53]
[01:20:53] Protein: p591_BBA5_pf
[01:20:53] - Run: 52 (Clone 98, Gen 0)
[01:20:53] - Frames Completed: 14, Remaining: 236
[01:20:53] - Dynamic steps required: 236000
[01:20:53]
[01:20:53] Writing local files:
[01:20:53]
[01:20:53] parameters work/wudata_08.prm
[01:20:53] - Writing "work/wudata_08.key": (overwrite) successful.
[01:20:53] - Writing "work/wudata_08.xyz": (overwrite) successful.
[01:20:53] - Writing "work/wudata_08.prm": (overwrite) successful.
[01:20:53] - Writing "work/wudata_08.key": (append) successful.
[01:20:53]
[01:20:53] PROJECT="work/wudata_08", NSTEPS=236000, DT=2.0000, DTDUMP=2.000000, TEMP=298.00
[01:20:54] TINKER: Software Tools for Molecular Design
[01:20:54] Version 3.8 October 2000
[01:20:54] Copyright (c) Jay William Ponder 1990-2000
[01:20:54] portions Copyright (c) Michael Shirts 2001
[01:20:54] portions Copyright (c) Vijay S Pande 2001
There's a few things in there I don't remember seeing before these problems started. If no one has any ideas, I'll fully delete and reload folding again.
Here's the log file, starting a few frames from finishing the last job:
[01:08:50] Finished a frame (245)
[01:09:25] Finished a frame (246)
[01:09:59] Finished a frame (247)
[01:10:34] Finished a frame (248)
[01:11:09] Finished a frame (249)
[01:11:44] Finished a frame (250)
[01:11:44] TINKER is Exiting following Normal Termination
[01:11:44]
[01:11:44] Finished Work Unit:
[01:11:44] ARC file integrity verified
[01:11:44] logfile size: 12529
[01:11:44] Leaving Run
[01:11:49] - Writing 652753 bytes of core data to disk.
[01:11:49] end (WriteWorkResults)
[01:11:49] - Shutting down core
[01:11:49]
[01:11:49] Folding@home Core Shutdown: FINISHED_UNIT
[01:11:53] CoreStatus = 64 (100)
[01:11:53] Sending work to server
[01:11:53] + Attempting to send results
[01:12:15] + Results successfully sent
[01:12:15] Thank you for your contribution to Folding@Home.
[01:12:15] + Number of Units Completed: 7
[01:12:19] - Preparing to get new work unit...
[01:12:19] + Attempting to get work packet
[01:12:19] - Connecting to assignment server
[01:12:19] - Successful: assigned to (171.65.103.148).
[01:12:19] + News From Folding@Home: Welcome to Folding@Home
[01:12:19] Loaded queue successfully.
[01:12:20] + Closed connections
[01:12:20]
[01:12:20] + Processing work unit
[01:12:20] Core required: FahCore_65.exe
[01:12:20] Core found.
[01:12:20] Working on Unit 08 [December 12 01:12:20]
[01:12:20] + Working ...
[01:12:20] Folding@Home Client Core Version 2.53 (June 29, 2004)
[01:12:20]
[01:12:20] Proj: work/wudata_08
[01:12:20] Done: 9641 -> 59946 (decompressed 621.7 percent)
[01:12:20] nsteps: 250000 dt: 2.000000 dt_dump: 20.000000 temperature: 298.000000
[01:12:20] xyzfile:
[01:12:20] " 385 p591_BBA5_pf
[01:12:20] 1 CT 41.760000 30.940000 2.440000 340 2..."
[01:12:20] keyfile:
[01:12:20] "NOVERSION
[01:12:20] ARCHIVE
[01:12:20]
[01:12:20] VDW-CUTOFF 10.0
[01:12:20] VDW-TAPER 8.0
[01:12:20] REACTIONFIELD 10...."
[01:12:20]
[01:12:20] - Couldn't get size info for dyn file: work/wudata_08.dyn
[01:12:20] Starting from initial work packet
[01:12:20]
[01:12:20] Protein: p591_BBA5_pf
[01:12:20] - Run: 52 (Clone 98, Gen 0)
[01:12:20] - Frames Completed: 0, Remaining: 250
[01:12:20] - Dynamic steps required: 250000
[01:12:20]
[01:12:20] Writing local files:
[01:12:20]
[01:12:20] parameters work/wudata_08.prm
[01:12:20] - Writing "work/wudata_08.key": (overwrite) successful.
[01:12:20] - Writing "work/wudata_08.xyz": (overwrite) successful.
[01:12:20] - Writing "work/wudata_08.prm": (overwrite) successful.
[01:12:20] - Writing "work/wudata_08.key": (append) successful.
[01:12:20]
[01:12:20] PROJECT="work/wudata_08", NSTEPS=250000, DT=2.0000, DTDUMP=2.000000, TEMP=298.00
[01:12:21] TINKER: Software Tools for Molecular Design
[01:12:21] Version 3.8 October 2000
[01:12:21] Copyright (c) Jay William Ponder 1990-2000
[01:12:21] portions Copyright (c) Michael Shirts 2001
[01:12:21] portions Copyright (c) Vijay S Pande 2001
[01:12:55] Finished a frame (1)
[01:13:30] Finished a frame (2)
[01:14:05] Finished a frame (3)
[01:14:40] Finished a frame (4)
[01:15:14] Finished a frame (5)
[01:15:49] Finished a frame (6)
[01:16:24] Finished a frame (7)
[01:16:59] Finished a frame (8)
[01:17:34] Finished a frame (9)
[01:18:08] Finished a frame (10)
[01:18:43] Finished a frame (11)
[01:19:18] Finished a frame (12)
[01:19:53] Finished a frame (13)
[01:20:27] Finished a frame (14)
--- Opening Log file [December 12 01:20:48]
# Windows Graphical Edition ###################################################
###############################################################################
Folding@Home Client Version 5.03
http://folding.stanford.edu
###############################################################################
###############################################################################
Launch directory: C:\Program Files\Folding@Home
[01:20:48] - Ask before connecting: No
[01:20:48] - User name: Tim225 (Team 93)
[01:20:48] - User ID: 7752F2927579D5AD
[01:20:48] - Machine ID: 1
[01:20:48]
[01:20:48] Loaded queue successfully.
[01:20:48] Initialization complete
[01:20:48] + Benchmarking ...
[01:20:51]
[01:20:51] + Processing work unit
[01:20:51] Core required: FahCore_65.exe
[01:20:51] Core found.
[01:20:51] Working on Unit 08 [December 12 01:20:51]
[01:20:51] + Working ...
[01:20:52] + Working...
[01:20:53] Folding@Home Client Core Version 2.53 (June 29, 2004)
[01:20:53]
[01:20:53] Proj: work/wudata_08
[01:20:53] Done: 9641 -> 59946 (decompressed 621.7 percent)
[01:20:53] nsteps: 250000 dt: 2.000000 dt_dump: 20.000000 temperature: 298.000000
[01:20:53] xyzfile:
[01:20:53] " 385 p591_BBA5_pf
[01:20:53] 1 CT 41.760000 30.940000 2.440000 340 2..."
[01:20:53] keyfile:
[01:20:53] "NOVERSION
[01:20:53] ARCHIVE
[01:20:53]
[01:20:53] VDW-CUTOFF 10.0
[01:20:53] VDW-TAPER 8.0
[01:20:53] REACTIONFIELD 10...."
[01:20:53]
[01:20:53] Hashes matched on file work/wudata_08.dyn
[01:20:53] ARC file integrity verified
[01:20:53] Restarting from checkpointed files.
[01:20:53]
[01:20:53] Protein: p591_BBA5_pf
[01:20:53] - Run: 52 (Clone 98, Gen 0)
[01:20:53] - Frames Completed: 14, Remaining: 236
[01:20:53] - Dynamic steps required: 236000
[01:20:53]
[01:20:53] Writing local files:
[01:20:53]
[01:20:53] parameters work/wudata_08.prm
[01:20:53] - Writing "work/wudata_08.key": (overwrite) successful.
[01:20:53] - Writing "work/wudata_08.xyz": (overwrite) successful.
[01:20:53] - Writing "work/wudata_08.prm": (overwrite) successful.
[01:20:53] - Writing "work/wudata_08.key": (append) successful.
[01:20:53]
[01:20:53] PROJECT="work/wudata_08", NSTEPS=236000, DT=2.0000, DTDUMP=2.000000, TEMP=298.00
[01:20:54] TINKER: Software Tools for Molecular Design
[01:20:54] Version 3.8 October 2000
[01:20:54] Copyright (c) Jay William Ponder 1990-2000
[01:20:54] portions Copyright (c) Michael Shirts 2001
[01:20:54] portions Copyright (c) Vijay S Pande 2001
There's a few things in there I don't remember seeing before these problems started. If no one has any ideas, I'll fully delete and reload folding again.
0
Comments
Some units reach a point where they cannot be calculated any further because of the boundary conditions. You know, reality.