"Evo" Scratch Built Water cooled PC
Editor22's "Evolution PC" was entirely built from scratch and it's stunning!
http://www.mnpctech.com/casemodblog/2011/01/21/evolution-pc-by-editor22/
http://www.mnpctech.com/casemodblog/2011/01/21/evolution-pc-by-editor22/
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Repeat after me...
Power supply in TOP of case, water cooling stuff in BOTTOM of case, or somewhere below and well away from the power supply..........
You should just build carefully.
edit: you also want any res at the highest point so you can bleed air out of the system easier.